Deep Sequencing Data Browser

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Ensembl Genome Browser: {{variantObject.selectedGene.name}}

Proteomic evidence of {{variantObject.saps.length + variantObject.alternativeSplices.length}} alternative splicing events or SAPs falling in the below categories:

Evidence Type	Splice Variant
Evidence Type	Inclusion	Exclusion
Peptides	{{variantObject.variantButtons[0].form1Peptides}}	{{variantObject.variantButtons[0].form2Peptides}}

Evidence Type	Form
Evidence Type	Inclusion	Exclusion
Peptides	{{variantObject.variantButtons[1].form1Peptides}}	{{variantObject.variantButtons[1].form2Peptides}}

Evidence Type	Form
Evidence Type	Inclusion	Exclusion
Peptides	{{variantObject.variantButtons[2].form1Peptides}}	{{variantObject.variantButtons[2].form2Peptides}}

Evidence Type	Form
Evidence Type	Inclusion	Exclusion
Peptides	{{variantObject.variantButtons[3].form1Peptides}}	{{variantObject.variantButtons[3].form2Peptides}}

Evidence Type	Form
Evidence Type	Inclusion	Exclusion
Peptides	{{variantObject.variantButtons[4].form1Peptides}}	{{variantObject.variantButtons[4].form2Peptides}}

Evidence Type	Form
Evidence Type	Inclusion	Exclusion
Peptides	{{variantObject.variantButtons[5].form1Peptides}}	{{variantObject.variantButtons[5].form2Peptides}}

Evidence Type	Form
Evidence Type	Inclusion	Exclusion
Peptides	{{variantObject.variantButtons[6].form1Peptides}}	{{variantObject.variantButtons[6].form2Peptides}}

Evidence Type	Form
Evidence Type	Inclusion	Exclusion
Peptides	{{variantObject.variantButtons[7].form1Peptides}}	{{variantObject.variantButtons[7].form2Peptides}}

Data Type	Form
Data Type	Reference	Alternate
Peptides	{{variantObject.variantButtons[9].referencePeptides}}	{{variantObject.variantButtons[9].alternatePeptides}}

Filter Peptides by Cell Line:

{{variantObject.cellLines[0].name}} {{variantObject.cellLines[1].name}} {{variantObject.cellLines[2].name}} {{variantObject.cellLines[3].name}} {{variantObject.cellLines[4].name}} {{variantObject.cellLines[5].name}}

Filter Peptides by Proteolytic Enzyme:

{{variantObject.enzymes[0].name}} {{variantObject.enzymes[1].name}} {{variantObject.enzymes[2].name}} {{variantObject.enzymes[3].name}} {{variantObject.enzymes[4].name}} {{variantObject.enzymes[5].name}} {{variantObject.enzymes[6].name}}

Filter Peptides by Activation Technique:

{{variantObject.activationTypes[0].name}} {{variantObject.activationTypes[1].name}} {{variantObject.activationTypes[2].name}} {{variantObject.activationTypes[3].name}}

Detailed Peptide Evidence for Single Amino Acid Polymorphisms:

Gene Name	Reference/Alternate	Peptide Sequence	Precursor Charge	Precursor m/z	Precursor RT (mins)	Proteolytic Enzyme	Activation	Cell Line

Detailed Peptide Evidence for Alternative Splicing Events:

Gene Name	Splicing Type	Splicing Form	Peptide Sequence	Precursor Charge	Precursor m/z	Precursor RT (mins)	Proteolytic Enzyme	Activation	Cell Line